Technology and Research Platforms

Scientific Databases

Research groups at the John Innes Centre are making an effort to offer open access to their research, and research data via online portals and data-sets.

Some of the resources below are archived for browsing, while some remain actively updated.

  • SeedStor – The Germplasm Resources Unit is an internationally recognised repository for the long-term curation and provision of crop germplasm resources
  • StrepDB – Streptomyces.org gives access to information for S. clavuligerus, S. avermitilis, S. griseus, S. scabies and S. coelicolor. It also features information about API access
  • SapFeederHub – Genome sequence and gene and protein annotations of sap-feeding insect species
  • OpenAshDieback – As part of a cross-institute project to fight ash dieback, OpenAshDieBack has made sequence data openly available online via GitHub
  • PGene – Germplasm accession and gene list databases for Pisum
  • Wheat Expression – Wheat gene expression atlas to determine where genes are expressed across over 1000 publicly available RNA-Seq samples
  • Wheat Training – Wheat Training provides information and practical resources to help plants scientists interested in working on wheat
  • Wheat TILLING – Original analysis of wheat exome capture data for 1,535 tetraploid Kronos and 1,200 hexaploid Cadenza mutants against the IWGSC Chinese Spring chromosome arm survey sequence