PCGIN Publications

Publications to come out of the Pulse Crop Genetic Improvement Network;

Moreau C., Knox M., Turner L., Rayner T., Thomas J., Philpott H., Belcher S., Fox K., Ellis N., Domoney C. (2018) Recombinant inbred lines derived from cultivars of pea for understanding the genetic basis of variation in breeders’ traits. Plant Genetic Resources 16: 424-436

Ghosh S., Watson A., Gonzalez-Navarro O. E., Ramirez-Gonzalez R., Yanes L., Mendoza-Suarez M., Simmonds J., Wells R., Rayner T., Green P., Hafeez A., Hayta S., Melton R. E., Steed A., Sarkar A., Carter J., Perkins L., Lord J., Tester M., Osbourn A., Moscou M. J., NICHOLSON P., Harwood W., Martin C., Domoney C., Uauy C., Hazard B., Wulff B. B. H., Hickey L. (2018) Speed breeding in growth chambers and glasshouses for crop breeding and model plant research. Nature Protocols 13: 2944-2963

Ellis N., Hattori C., Cheema J., Donarski J., Charlton A., Dickinson M., Venditti G., Kaló P., Szabó Z., Kiss G., Domoney C. (2018) NMR metabolomics defining genetic variation in pea seed metabolites. Frontiers in Plant Science 9: 102.2

Perez-Moral N., Plankeele J. M., Domoney C., Warren F. J. (2018) Ultra-high performance liquid chromatography-size exclusion chromatography (UPLC-SEC) as an efficient tool for the rapid and highly informative characterisation of biopolymers. Carbohydrate Polymers 196: 422-426

Rayner T., Moreau C., Isaac P. G., Domoney C. (2018) Genetic diversity and strategies for seed quality enhancement in Pisum (pea). Aspects of Applied Biology 138: 141-147

Maalouf F., Hu J., O’Sullivan D.M., Zong X., Hamwieh A., Kumar S. Baum M. (2018) Breeding and genomics status in faba bean (Vicia faba L) Plant Breeding 2018: 1-9

Ghosh S., Watson A., Gonzalez-Navarro O. E., Ramirez-Gonzalez R., Yanes L., Mendoza-Suárez M., Simmonds J., Wells R., Rayner T., Green P., Hafeez A., Hayta S., Melton R. E., Steed A., Sarkar A., Carter J., Perkins L., Lord J., Tester M., Osbourn A., Moscou M. J., Nicholson P., Harwood W., Martin C., Domoney C., Uauy C., Hazard B., Wulff B. B. H., Hickey L. T. (2018) Speed breeding in growth chambers and glasshouses for crop breeding and model plant research. bioRxiv.

Moreau C., Hofer J. M. I., Eléouët M., Sinjushin A., Ambrose M., Skøt K., Blackmore T., Swain M., Hegarty M., Balanzà V., Ferrándiz C., Ellis T. H. N. (2018) Identification of Stipules reduced, a leaf morphology gene in pea (Pisum sativum). New Phytologist.

Moore K. L., Rodriguez-Ramiro I., Jones E. R., Jones E. J., Rodriguez-Celma J., Halsey K., Domoney C., Shewry P. R., Fairweather-Tait S., Balk J. (2018) The stage of seed development influences iron bioavailability in pea (Pisum sativum L.). Scientific Reports 8: 6865.

Watson A., Ghosh S., Williams M. J., Cuddy W. S., Simmonds J., Rey M-D., Hatta M. A. M., Hinchliffe A., Steed A., Reynolds D., Adamski N. M., Breakspear A., Korolev A., Rayner T., Dixon L.E., Riaz A., Martin W., Ryan M., Edwards D., Batley J., Raman H., Carter J., Rogers C., Domoney C., Moore G., Harwood W., Nicholson P., Dieters M. J., Delacy I. H., Zhou J., Uauy C., Boden S. A., Park R. F., Wulff B. B. H., Hickey L. T. (2018) Speed breeding is a powerful tool to accelerate crop research and breeding. Nature Plants 4: 23–29. doi: 10.1038/s41477-017-0083-8

Rayner T., Moreau C., Ambrose M., Isaac P. G., Ellis N., Domoney C. (2017) Genetic variation controlling wrinkled seed phenotypes in Pisum: how lucky was Mendel? International Journal of Molecular Sciences 18(6): 1205. doi:10.3390/ijms18061205

Bishop J., Jones H.E., O’sullivan D.M., Potts S.G. (2017). Elevated temperature drives a shift from selfing to outcrossing in the insect-pollinated legume, faba bean (Vicia faba). Journal of Experimental Botany 68: 2055-63. doi: 10.1093/jxb/erw430

Petropoulou K., Chambers E.S., Morrison D.J., Preston T., Godsland I.F., Wilde P., Narbad A, Parker R, Salt L., Morris V.J., Domoney C, Persaud S.J., Holmes E., Penson S., Watson J., Stocks M., Buurman M., Luterbacher M., Frost G. (2016) Identifying crop variants with high resistant starch content to maintain healthy glucose homeostasis. Nutrition Bulletin 41(4): p372–377. doi: 10.1111/nbu.12240

Smýkal P., Varshney R.K., Singh V.K., Coyne C.J. Domoney C., Kejnovský E., Warkentin T. (2016) From Mendel’s discovery on pea to today’s plant genetics and breeding, Commemorating the 150th anniversary of the reading of Mendel’s discovery. Theoretical and Applied Genetics 129(12): p2267–2280. doi: 10.1007/s00122-016-2803-2

O’Sullivan D.M., Angra D. (2016) Advances in faba bean genetics and genomics. Frontiers in Genetics 7: 150. doi: 10.3389/fgene.2016.00150

Webb A., Cottage A., Wood T., Khamassi K., Hobbs D., Gostkiewicz K., Duc G., Stoddard F., Maalouf F., Ogbonnaya F., Link W., Thomas J. O’Sullivan D.M. (2016) A SNP-based consensus genetic map for synteny-based trait targeting in faba bean (Vicia faba L.). Plant Biotechnology Journal 14:177-85. doi: 10.1111/pbi.12371

Bell A., Moreau C., Chinoy C., Spanner R., Dalmais M., Le Signor C., Bendahmane A., Klenell M., Domoney C. (2015) SGRL can regulate chlorophyll metabolism and contributes to normal plant growth and development in Pisum sativum L. Plant Molecular Biology 89(6): p539-558. doi: 10.1007/s11103-015-0372-4

Clemente A., Arques M.C., Dalmais M., Le Signor C., Chinoy C., Olias R., Rayner T., Isaac P.G., Lawson D.M., Bendahmane A., Domoney C. (2015) Eliminating anti-nutritional plant food proteins: the case of seed protease inhibitors in Pea. PLoS ONE 10(8): e0134634. doi:10.1371/journal.pone.0134634

Khazaei H., O’sullivan D.M., Jones H., Pitt N., Sillanpää M.J., Pärssinen P., Manninen O. Stoddard F. (2015) SNP markers linked to the locus controlling levels of the anti-nutritional factors vicine and convicine in Vicia faba L. Molecular Breeding, 35: 38. doi: 10.1007/s11032-015-0214-8

Warkentin T., Smykal P., Coyne C., Weeden N., Domoney C., Bing D., Leonforte T., Xuxiao Z., Dixit G., Boros L., Mcphee K., Mcgee R., Burstin J., Ellis N. (2014) Pea (Pisum sativum L.) Grain Legumes. (Handbook of Plant Breeding Vol 10) Springer Science and Business Media Grain Legumes. ISBN 978-1-4939-2796-8

Vaz Patto M., Amarowicz R., Aryee A., Boye J., Chung H., Martin-Cabrejas M., Domoney C. (2014) Achievements and challenges in improving the nutritional quality of food legumes. Critical Reviews in Plant Sciences 34(1-3): 105-143. doi: 10.1080/07352689.2014.897907

Khazaei H., O’sullivan D.M., Sillanpaa M.J., Stoddard F.L. (2014). Use of synteny to identify candidate genes underlying QTL controlling stomatal traits in faba bean (Vicia faba L.). Theoretical and Applied Genetics 127: 2371-85. doi: 10.1007/s00122-014-2383-y

Khazaei H., O’sullivan D.M., Sillanpää M.J. Stoddard F.L. (2014) Genetic analysis reveals a novel locus in Vicia faba decoupling pigmentation in the flower from that in the extra-floral nectaries. Molecular Breeding 3:1507-1513.

Domoney C., Knox M., Moreau C., Ambrose M., Palmer S., Smith P., Christodoulou V., Isaac P., Hegarty M., Blackmore T., Swain M., Ellis N. (2013) Exploiting a fast neutron mutant genetic resource in Pisum sativum (pea) for functional genomics. Functional Plant Biology 40: 1261-1270. doi: 10.1071/FP13147

Clemente A., Marin-Manzano M., Arques M., Domoney C. (2013) Bowman-Birk inhibitors from legumes: utilisation in disease prevention and therapy. Bioactive Food Peptides in Health and Disease (Editors: Hernandez-Ledesma B., Hsieh C. C.) INTECH 23-44. doi: 10.5772/51262

Khamassi K., Ben Jeddi F., Hobbs D., Irigoyen J., Stoddard F., O’sullivan D.M., Jones H. (2013). A baseline study of vicine-convicine levels in faba bean (Vicia faba L.) germplasm. Plant Genetic Resources 11: 250-7.

Clemente A., Marin-Manzano C., Jimenez E., Arques M., Domoney C. (2012) The anti-proliferative effect of TI1B, a major Bowman-Birk isoinhibitor from pea (Pisum sativum L.), on HT29 colon cancer cells is mediated through protease inhibition. British Journal of Nutrition 108: S135-S144. doi: 10.1017/S000711451200075X

Cottage A., Gostkiewicz K., Thomas J., Borrows R., Torres A-M., O’sullivan D. (2012) Heterozygosity and diversity analysis using mapped SNPs in a faba bean inbreeding programme. Molecular Breeding 30: 1799–1809. doi: 10.1007/s11032-012-9745-4

Clemente A., Sonnante G., Domoney C. (2011) Bowman-Birk inhibitors from legumes and human gastrointestinal health: current status and perspectives. Current Protein and Peptide Science 12: 358-373. PMID: 21418025

Rubiales D., Ambrose M., Domoney C., Burstin J. (2011) Pea (Pisum sativum L.) Genetics, Genomics and Breeding in Crop Plants: Cool Season Food Legumes (Editors: de la Vega M. P., Torres A. M., Cubero J. I., Kole C.) Science Pubs Inc., USA, New Hampshire, Jersey, Plymouth, 1-49. ISBN: 978-1-4398-8339-6

Clemente A., Marin-Manzano M., Domoney C. (2011) Exploiting natural variation in legume Bowman-Birk inhibitors to dissect their potential role in human health-promoting programmes. Canadian Journal of Plant Science 91: 377-378. doi: 10.4141/CJPS11501

Chinoy C., Welham T., Turner L., Moreau C., Domoney C. (2011) The genetic control of seed quality traits: effects of allelic variation at the Tri and Vc-2 genetic loci in Pisum sativum L. Euphytica 180: 107-122 doi: 10.1007/s10681-011-0363-8

Ellis N. (2011) Germplasm resources in legumes. Plant Genetic Resources 9: 1-3. doi: 10.1017/S1479262110000432

Smykal P., Kenicer G., Flavell A., Corander J., Kosterin O., Redden R., Ford R., Coyne C., Maxted N., Ambrose M., Ellis N. (2011) Phylogeny, phylogeography and genetic diversity of the Pisum genus. Plant Genetic Resources 9: 4-18. doi: 10.1017/S147926211000033X

Clemente A., Moreno F., Marin-Manzano M., Jimenez E., Domoney C. (2010) The cytotoxic effect of Bowman-Birk isoinhibitors, IBB1 and IBBD2, from soybean (Glycine max) on HT29 human colorectal cancer cells is related to their intrinsic ability to inhibit serine proteases. Molecular Nutrition & Food Research 54: 396-405. doi: 10.1002/mnfr.200900122

Hofer J., Turner L., Moreau C., Ambrose M., Isaac P., Butcher S., Weller J., Dupin A., Dalmais M., Le Signor C., Bendahmane A., Ellis N. (2009) Tendril-less regulates tendril formation in pea leaves. Plant Cell 21: 420-428. doi: 10.1105/tpc.108.064071

Vigeolas H., Chinoy C., Zuther E., Blessington B., Geigenberger P., Domoney C. (2008) Combined metabolomic and genetic approaches reveal a link between the polyamine pathway and albumin 2 in developing pea seeds. Plant Physiology 146: 74-82. doi: 10.1104/pp.107.111369

Charlton A., Donarski J., Harrison M., Jones S., Godward J., Oehlschlager S., Arques J., Ambrose M., Chinoy C., Mullineaux P., Domoney C. (2008) Responses of the pea (Pisum sativum L.) leaf metabolome to drought stress assessed by nuclear magnetic resonance spectroscopy. Metabolomics 4: 312-327. doi: 10.1007/s11306-008-0128-0