John Innes Centre

Prof Peter Shaw

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Curriculum Vitae

  • 1972 B.A. University of Cambridge
  • 1976 PhD. Department of Biochemistry, University of Bristol
  • 1975-1976 Post-doctoral Fellow, Department of Biochemistry, University of Birmingham
  • 1976-1979 Post-doctoral Fellow, Department of Biochemistry, University of Bristol
  • 1979 - present Project Leader, John Innes Centre
  • 1987 Visiting Research Fellow, University of California, San Francisco, USA
  • 2001-present Associate Head of Cell and Developmental Biology Department, John Innes Centre, UK
  • 2002-present Honorary Professor. University of East Anglia, UK

Peter Shaw

Associate Head of Department

Cell & Developmental Biology

Contact details

peter.shaw@jic.ac.uk

Research interests

Organization of interphase chromosomes and transcription. we are investigating the organization of interphase chromosome territories, how transcription is related to and regulated by this organization. For these studies we are using wheat, because of its large nuclei, relatively good cytology and importance as a crop plant, and Arabidopsis because of its excellent genetic and genomic resources.

Organization of the nucleolus. in a collaborative project with John Brown (Scottish Crop Research Institute, Dundee) we are analysing the nucleolar proteome and 'RNA'ome. This has indicated that the nucleolus is involved in more functions than ribosome biogenesis, including mRNA surveillance and nonsense mediated degradation. Database available at: http://bioinf.scri.sari.ac.uk/cgi-bin/atnopdb/home

Nuclear Cajal bodies. Cajal bodies (formerly called coiled bodies) are sub-nuclear organelles present in both plants and animals. They are involved in small nuclear and nucleolar RNA metabolism and probably also have other functions. using GFP, we have shown that they are mobile, dynamic structures within plant cells. In collaboration with Liam Dolan, we are taking a genetic approach to defining their function and assembly in Arabidopsis.

Homologue pairing in meiosis. in an ongoing collaborative project with Graham Moore's group (JIC, Crop Genetics) we are investigating the mechanism of meiotic homologue recognition and pairing in Arabidopsis and wheat. An important focus in wheat is the analysis of the mechanism of the Ph1 locus, which controls specificity of homologue pairing in wheat, and which involves centromere behaviour.

 

Selected Publications

Kim S. H., Koroleva O. A., Lewandowska D., Pendle A. F., Clark G. P., Simpson C. G., Shaw P. J., Brown J. W. (2009)
Aberrant mRNA transcripts and the nonsense-mediated decay proteins UPF2 and UPF3 are enriched in the Arabidopsis nucleolus
Plant Cell 21 (7) 2045-2057
DOI:10.1105/tpc.109.067736
Koroleva O. A., Calder G., Pendle A. F., Kim S. H., Lewandowska D., Simpson C. G., Jones I. M., Brown J. W., Shaw P. J. (2009)
Dynamic behavior of Arabidopsis eIF4A-III, putative core protein of exon junction complex: fast relocation to nucleolus and splicing speckles under hypoxia
Plant Cell 21 (5) 1592-1606
DOI:10.1105/tpc.108.060434
Moore G., Shaw P. (2009)
Improving the chances of finding the right partner.
Current Opinion in Genetics and Development 19 (2) 99-104
DOI:10.1016/j.gde.2009.02.006
Shaw P., Dolan L. (2008)
Chromatin and Arabidopsis root development
Seminars in Cell and Developmental Biology 19 (6) 580-5
DOI:10.1016/j.semcdb.2008.09.001

Recent Publications

Greer E., Martín A. C., Pendle A., Colas I., Jones A. M., Moore G., Shaw P. (2012)
The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat
Plant Cell
DOI:10.1105/tpc.111.094771
Schubert I., Shaw P. (2011)
Organization and dynamics of plant interphase chromosomes.
Trends in Plant Science 16 (5) 273-281
DOI:10.1016/j.tplants.2011.02.002
Shaw P. J., Brown J. W. (2011)
Nucleoli: composition, function and dynamics
Plant Physiology 158 (1) 44-51
DOI:10.1104/pp.111.188052
Shaw P. J., McKeown P. C. (2011)
The structure of rDNA chromatin
The Nucleolus
Springer, New York
15 (3) 43-56
DOI:10.1007/978-1-4614-0514-6_3
Colas I., Koroleva O., Shaw P. (2010)
Mass spectrometry in plant proteomic analysis.
Plant Biosystems 144 (3) 703-714
DOI:10.1080/11263501003764392
Dvorackova M., Rossignol P., Shaw P. J., Koroleva O. A., Doonan J. H., Fajkus J. (2010)
AtTRB1, a telomeric DNA-binding protein from Arabidopsis, is concentrated in the nucleolus and shows highly dynamic association with chromatin
Plant Journal 61 (4) 637-649
Kim S. H., Spensley M., Choi S. K., Calixto C. P., Pendle A. F., Koroleva O., Shaw P. J., Brown J. W. (2010)
Plant U13 orthologues and orphan snoRNAs identified by RNomics of RNA from Arabidopsis nucleoli.
Nucleic Acids Research 38 (9) 3054-3067
DOI:10.1093/nar/gkp1241
Knight E., Greer E., Draeger T., Thole V., Reader S., Shaw P., Moore G. (2010)
Inducing chromosome pairing through premature condensation:analysis of wheat interspecific hybrids
Functional and Integrative Genomics
DOI:10.1007/s10142-010-0185-0
Shaw P. J. (2010)
Nucleolus
Encyclopedia of Life Sciences
Wiley Online
E-only (N/A) 9780470015902.a0001352.pub3
DOI:10.1002/9780470015902.a0001352.pub3
Shaw P. J. (2010)
Mapping chromatin conformation
F1000 Biology Reports 2 N/A
DOI:10.3410/B2-18