John Innes Centre

Dr David Lawson

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Curriculum Vitae

  • 1985 BSc Biochemistry Special Honours, University of Sheffield, UK
  • 1986 MSc Tech. Information Technology, University of Sheffield, UK
  • 1990 PhD Protein X-Ray Crystallography, University of Sheffield, UK
  • 1990 - 1995 Postdoctoral Fellow, University of York, UK
  • 1995 - present Project Leader, John Innes Centre, UK
  • 2004 - present Honorary Senior Lecturer, University of East Anglia, UK

David Lawson

Project Leader

Biological Chemistry

Contact details

david.lawson@jic.ac.uk

Research interests

Main research areas


Ligand-responsive transcriptional control in Streptomycetes
In order to survive and compete effectively, bacteria must continuously monitor both their surroundings and their physiological status, and react appropriately. The resultant cellular responses are frequently triggered by the binding of small signaling molecules to regulatory proteins. Ligand-responsive transcription factors are particularly abundant in Streptomycetes, reflecting their complex life cycles and rich natural product profiles. We wish to understand how these transcription factors recognise and bind to the operator sequences of the genes that they regulate and how these interactions are in turn modulated allosterically by effector ligands. These studies will help to define the biological roles of these transcription factors and their positions within complex signaling networks.
 

Antibiotic biosynthesis in Streptomycetes
Streptomycetes produce the majority of antibiotics used in human and veterinary medicine and agriculture, as well as anti-tumour and anti-parasitic agents, herbicides, and other pharmacologically active metabolites. Through studying the biosynthetic pathways for these antibiotics, we aim to inform the manipulation of these pathways towards the development of novel compounds with therapeutic potential. Furthermore, our structure-function analyses of key enzymes provides deep insights into their mechanisms, specificities and evolution.
 

Molecular basis of action of antibiotics against DNA topoisomerases
Topoisomerases are validated targets for antimicrobial therapy, and thus of considerable clinical interest. We are particularly interested in the essential bacterial enzyme DNA gyrase, which is targeted by a variety of compounds, most notably the quinolones and the aminocoumarins. The structures of DNA gyrase in complex with these antibiotics provide molecular level understanding of how these compounds work and how resistance may develop against them. This information may help in the design of novel compounds that may also be effective inhibitors of this enzyme.
 

The structural enzymology of carbohydrate active enzymes
We are studying a variety of carbohydrate active enzymes from both plant and microbial sources. Through analysing their structures and mechanisms, we propose to develop them as chemical tools, to exploit them as antibacterial targets, and to better understand carbon metabolism in plants and microbes.

Recent Publications

Ashby J. A., Stevenson C. E., Jarvis G. E., Lawson D. M., Maule A. J. (2011)
Structure-based mutational analysis of eIF4E in relation to SBM1 resistance to pea seed-borne Mosaic virus in pea
PLoS One 6 (1) e15873
DOI:10.1371/journal.pone.0015873
Le T. B., Schumacher M. A., Lawson D. M., Brennan R. G., Buttner M. J. (2011)
The crystal structure of the TetR family transcriptional repressor SimR bound to DNA and the role of a flexible N-terminal extension in minor groove binding.
Nucleic Acids Research 39 (21) 9433-9447
DOI:10.1093/nar/gkr640
Le T. B., Stevenson C. E., Fiedler H. P., Maxwell A., Lawson D. M., Buttner M. J. (2011)
Structures of the TetR-like simocyclinone efflux pump repressor, SimR, and the mechanism of ligand-mediated derepression
Journal of Molecular Biology 408 (1) 40-56
DOI:10.1016/j.jmb.2011.02.035
Le T., Stevenson C. E. M., Buttner M. J., Lawson D. M. (2011)
Crystallization and preliminary X-ray analysis of theTetR-like efflux pump regulator SimR
Acta Crystallographica Section F F67 307-309
Rejzek M., Stevenson C. E., Southard A. M., Stanley D., Denyer K., Smith A. M., Naldrett M. J., Lawson D. M., Field R. A. (2011)
Chemical genetics and cereal starch metabolism: structural basis of the non-covalent and covalent inhibition of barley beta-amylase.
Molecular BioSystems 7 (3) 718-730
DOI:10.1039/C0MB00204F, Paper
Syson K., Stevenson C. E. M., Rejzek M., Fairhurst S. A., Nair A., Bruton C. J., Field R. A., Chater K. F., Lawson D. M., Bornemann S. (2011)
Structure of a Streptomyces maltosyltransferase GlgE: a homologue of a genetically validated anti-tuberculosis target
Journal of Biological Chemistry 286 (44) 38298-38310
DOI:10.1074/jbc.M111.279315
Gómez García I., Stevenson C. E., Usón I., Freel Meyers C. L., Walsh C. T., Lawson D. M. (2010)
The crystal structure of the novobiocin biosynthetic enzyme NovP: the first representative structure for the TylF O-Methyltransferase superfamily
Journal of Molecular Biology 395 (2) 390-407
DOI:10.1016/j.jmb.2009.10.045
Metzger U., Keller S., Stevenson C. E. M., Heide L., Lawson D. M. (2010)
Structure and mechanism of the magnesium-independent aromatic prenyltransferase CloQ from the clorobiocin biosynthetic pathway
Journal of Molecular Biology 404 (4) 611-626